Property that describes the cell line of sample.
Property that describes the disease of sample.
Property that describes the disease class of sample.
Property that describes the used enzyme to convert proteins into peptides
Property that describes the amino acid mass modifications applied universally.
has indistinguishable peptide at MS level
Dataset and peptide evidence has a peptide.
Property that describes instrument on which the data has been generated.
Property that describes the mode of mass spectrometer.
Property that describes the purpose of mass spectrometry.
Property that describes the modification type.
Property that describes the organ of sample.
Property that describes the platform of quantification method.
Property that describes the quantification method.
Representative PSM flag in a peptide sequence-level
Property that describes the sample type of sample.
Property that describes the species from which the data has been generated.
Property that describes the tissue of sample.
Property that describes the possible amino acid mass modifications.
Property that describes the detected modification site by search engine, in the ambiguous modification site.
Property that describes the amino acid mass modifications site.
Property describes the number of fractions.
Property describes the number of replicates.
Property that describes the number of plex.
Property that describes the existence of corresponding confirmed site in other PSMs.
Calculated monoisotopic mass[obo:MS_1000225]-to-charge[obo:MS_1000041] ratio of mass spectrum.
a used enzyme to convert proteins into peptides.
Experimental monoisotopic mass[obo:MS_1000225]-to-charge[obo:MS_1000041] ratio of mass spectrum.
an amino acid mass modification applied universally.
metadata of sample fractionation processes.
fractionation process type, such as subcellular, protein and peptide-level.
subcellular-level fractionation process.
root node for terms relating to the description of jPOST.
root node for terms relating to the description of instrument modes.
root node for terms relating to the description of instrument purposes.
root node for terms relating to the description of quntification platforms.
root node for terms relating to the description of sample.
disease sample excludes cancer, nervous system disease, metabolic disease , cardiovascular system disease, infectious disease and immune system disease.
root node for terms relating to the description of modification class based on unimod.
Unit
femtomole [obo:UO_0000043] per picoliter [obo:UO_0000103]
Mass[obo:MS_1000225]-to-charge[obo:MS_1000041] ratio of mass spectrum.
a jPOST entry describing a matching ion type of PSM based on the sequence, PTMs and the charge, as a unit for calculating peptide FDR.
Measurement value for mass spectrometry-based proteomics
A type of amino asid mass modification based on unimod
Number of leading protein (obo:MS_1002401) infered from proteins in a dataset
Number of proteins matched with at least one peptide in a dataset
Number of proteins matched with at least one unique peptide in a dataset
area of peptide spectrum for quntification
intensity of peptide spectrum for quntification
a jPOST entry describing peptide evidence in mzIndentML.
a jPOST entry describing a peptide matched to spectrum.
plex information of multi-plex experiment
a jPOST entry describing a protein isoform in a dataset.
a jPOST entry describing a protein group
a jPOST entry describing a raw data of mass spectrometer run.
a jPOST entry describing a representative isoform in a dataset.
Peptide shared in multiple database sequence
Peptide shared in multiple database sequence at MS level. (not distinguish leucine and isoleucine)
a jPOST entry describing a spectrum of LC-MS/MS
Peptide unique to one database sequence at MS level. (not distinguish leucine and isoleucine)
a possible amino acid mass modification.
Experimental amino acid mass modification type in database search
Data-dependent acquisition high resoluiton mode of mass spectrometer.
Data-dependent acquisition low resoluiton mode of mass spectrometer.
Data-independent acquisition mode of mass spectrometer.